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Markers in Plant Biotechnology
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Flashcards
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Single Nucleotide Polymorphisms (SNPs)
Useful for high-resolution mapping and marker-assisted selection in plant breeding.
Simple Sequence Repeats (SSRs)
Applied in cultivar identification, genetic diversity studies, and parental analysis.
Cleaved Amplified Polymorphic Sequences (CAPS)
Practical for marker-assisted selection and validating quantitative trait loci (QTL).
Derived Cleaved Amplified Polymorphic Sequences (dCAPS)
Employed for detecting single base pair changes in sequences and in plant breeding strategies.
Single-Strand Conformation Polymorphism (SSCP)
Applied in mutation detection and as a fine mapping tool in genomics.
Micro-array-based markers
Used in the analysis of gene expression and the establishment of functional genomics relationships.
Quantitative Trait Loci (QTL) markers
Critical in marker-assisted selection and understanding the genetic basis of complex traits.
Random Amplified Polymorphic DNA (RAPD)
Utilized in genetic mapping and for genetic variation assessment in a population.
Amplified Fragment Length Polymorphisms (AFLPs)
Suitable for the construction of genetic linkage maps and biodiversity studies.
Inter-Simple Sequence Repeats (ISSRs)
Employed for DNA fingerprinting, variety protection, and evolutionary studies.
Sequence-Tagged Sites (STSs)
Ideal for physical mapping and verifying the presence of specific alleles or genes.
Expression Sequence Tags (ESTs)
Useful for identifying gene-rich areas and studying gene expression in plant genomes.
Restriction Fragment Length Polymorphisms (RFLPs)
Used for genome mapping, phylogenetic analysis, and identifying disease-resistant genes.
Sequence-Specific Amplified Polymorphisms (SSAPs)
Applied in retrotransposon analysis and tagging genes of interest.
Target Region Amplification Polymorphism (TRAP)
Used for genotyping, gene mapping and characterizing genetic diversity.
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