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Bioenergetics

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Oxidation-Reduction (Redox) Reactions

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Reactions where electrons are transferred between molecules, affecting their oxidation states.

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Acetyl-CoA

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An important molecule in metabolism, used in the citric acid cycle, it represents the junction between glycolysis and the Krebs cycle.

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Enzyme

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A biological catalyst that speeds up the rate of chemical reactions in biological processes without being consumed.

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Aerobic Respiration

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A form of cellular respiration that requires oxygen to generate ATP.

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Anabolic Pathways

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Metabolic pathways that involve the synthesis of complex molecules from simpler ones, generally requiring energy.

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Lipid Metabolism

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The process by which fatty acids are broken down or synthesized to generate energy or store energy, respectively.

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Coenzyme Q (Ubiquinone)

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A component of the electron transport chain that carries electrons from complexes I and II to complex III.

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Adenosine Triphosphate (ATP)

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ATP is the energy currency of the cell, releases energy when it loses a phosphate to become ADP.

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Energy Coupling

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The transfer of energy from catabolic to anabolic pathways, or vice versa.

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Phosphorylation

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The addition of a phosphate group to a molecule, often catalyzed by enzymes, increasing the molecule's energy content.

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Glycolysis

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A series of ten enzyme-catalyzed reactions that convert glucose into pyruvate, with a net production of ATP and NADH.

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Catabolic Pathways

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Metabolic pathways that break down molecules into smaller units and release energy.

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Endosymbiotic Theory

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A theory suggesting that some organelles, like mitochondria and chloroplasts, were once free-living bacteria that were engulfed by larger cells.

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Gibbs Free Energy

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The amount of energy available to do work; represented by the equation

ΔG=ΔHTΔS\Delta G = \Delta H - T\Delta S

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Adenosine Diphosphate (ADP)

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An important organic compound in metabolism, it is converted to ATP for the storage of energy during cell metabolism.

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Proton-Motive Force (PMF)

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The force that promotes movement of protons across membranes due to a proton gradient and membrane potential.

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Uncoupling Proteins

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Proteins in the inner mitochondrial membrane that allow protons to re-enter the mitochondrial matrix without energy being captured as ATP.

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Mitochondrial Electron Transport Chain (ETC)

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A series of protein complexes in the inner mitochondrial membrane where electrons are transferred to create a proton gradient.

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Calvin Cycle

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The set of chemical reactions that take place in chloroplasts during photosynthesis and do not require light.

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Anaerobic Respiration

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Respiration without oxygen; this produces less energy but allows organisms to convert energy for metabolism without the use of oxygen.

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Photosynthesis

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The process by which plants, algae, and some bacteria convert light energy into chemical energy stored in glucose.

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Chemiosmosis

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The movement of ions across a selectively permeable membrane, down their electrochemical gradient, coupled to ATP synthesis.

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Entropic Effect

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A thermodynamic quantity representing unavailability of system's energy to do work due to disorder.

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NAD+ / NADH

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Nicotinamide adenine dinucleotide (NAD+) is an electron carrier used in cellular respiration, reduced to NADH.

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Substrate-Level Phosphorylation

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ATP synthesis when a high energy phosphate group is directly transferred from a phosphorylated compound to ADP.

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Metabolic Pathway

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A series of chemical reactions that occur within a cell in which the product of one reaction is the substrate for the next reaction.

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Respiration

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The process in living organisms involving the production of energy, typically with the intake of oxygen and release of carbon dioxide.

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Metabolic Rate

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The rate at which metabolism occurs in a living organism.

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Oxidative Phosphorylation

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The process of generating ATP by the movement of electrons through the electron transport chain to drive proton pumping and ultimately power ATP synthase.

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Thermogenesis

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The process of heat production in organisms, which can occur through metabolic processes like muscle activity and shivering.

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Protein Complexes

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Groups of proteins that function as a unit, such as those found in the electron transport chain of the mitochondria.

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Biochemical Energy

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The form of energy contained within chemical bonds, which can be harnessed and transformed to do work during biological reactions.

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Oxygenic Photosynthesis

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A form of photosynthesis that produces oxygen and occurs in plants, algae, and cyanobacteria.

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Proton Gradient

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A gradient formed by the difference in proton concentrations across a membrane which stores potential energy.

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Citric Acid Cycle (Krebs Cycle)

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A series of chemical reactions used by all aerobic organisms to release stored energy through oxidation of acetyl-CoA.

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ATP Synthase

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An important enzyme that creates ATP from ADP and inorganic phosphate during the process of chemiosmosis.

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Fermentation

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A metabolic process that consumes sugar in the absence of oxygen. Products include alcohols or acids and the release of carbon dioxide.

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Activation Energy (Ea)

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The minimum quantity of energy that the reacting species must possess in order to undergo a specified reaction.

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FAD / FADH2

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Flavin adenine dinucleotide (FAD) is another electron carrier in respiration that is reduced to FADH2.

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